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基于MaxCompute的图计算实践分享-Resolver简介

2017-03-16 18:10 549 查看
原文链接:http://click.aliyun.com/m/13893/

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Resolver简介

在学习使用MaxCompute-Graph计算模型时,resolver是一个不容易理解的概念。在MaxCompute帮助文档 https://help.aliyun.com/document_detail/27903.html?spm=5176.doc27901.6.662.O0sGBI 中对于Resolver有相关介绍:VertexResolver 用于自定义图拓扑修改时的冲突处理逻辑.在Graph的迭代计算模型中,图的拓扑结构会在下面两个场景中发生变化:1,在图加载阶段(LOAD),worker会读取输入数据,然后发送修改图拓扑结构的请求;在RESOLVE_LOADING_MUTATION阶段,worker会根据LOAD阶段收到的图拓扑结构变更请求,对图的拓扑结构进行修改;2,在每个superstep的COMPUTE阶段,worker也会发送修改图拓扑结构的请求;在下一个superstep的RESOLVE_COMPUTING_MUTATION阶段,会处理收集到上个superstep中发送到该Vertex的请求,然后对图的拓扑结构进行修改。

图拓扑结构变化的流程

下图是COMPUTE阶段图拓扑结构发生变化的示例:

1,在superstep:k的compute阶段,vertex会试图改变图的拓扑结构,修改图拓扑结构的请求包括以下四种:addVertexRequest:添加顶点

removeVertexRequest:删除顶点

addEdgeRequest:添加边

removeEdgeRequest:删除边

这些改变图拓扑结构的请求并不会马上执行并返回,而只是记录在了目标顶点所在的worker上。2,这些改变图拓扑结构的请求会根据操作顶点的id,partition分发到对应worker上,每个worker会将在superstep:k中收集到的图变更请求保存在serverData.partitionMutations中。这样在superstep:k+1时,每个顶点可以从serverData中获取到对应自己操作的所有请求。3,在superstep:K+1的RESOLVE_COMPUTING_MUTATION阶段,worker会从serverData获取到对应每个vertexID的vertexChanges(即上一个superstep中对改顶点的图修改请求集合),分别对应然后将其作为参数调用用户定义的resole方法,在resolve方法中完成对当前Vertex结构的修改。4,完成RESOLVE_COMPUTING_MUTATION阶段之后,开始superstep:K+1的compute阶段。

如何定义resolver

用户可以自定义VertexResolver的实现,即自定义类继承VertexResolver并重写VertexResolver.resolve方法,然后在提交作业时通过:job.setLoadingVertexResolverClass(VertexResolver.class)

job.setComputingVertexResolverClass(VertexResolver.class)

分别指定在图加载阶段和COMPUTE阶段处理图拓扑结构修改请求的resolver实现类。对于LoadingVertexResolver,如果用户没有指定,框架会提供一个默认的DefaultLoadingVertexResolver实现;但是对于ComputingVertexResolver,如果没有指定,是没有默认实现的,就是说如果用户需要在compute阶段对图的拓扑结构进行修改,则必须指定Resolver实现,否则会抛异常。

关于“冲突”

为什么graph的框架需要用户去自定义Resolver的实现,一个很重要的原因是在处理修改图拓扑结构时可能会出现各种“冲突”。在graph模型中,修改图拓扑结构是一个异“步(superstep)”的请求,在某次superstep中发起的请求,需要到下一个superstep中才能生效。同时对于同一个顶点的修改请求,可能来自各个不同的worker,彼此之间不能相互感知,来自不同worker的请求先后顺序也是不确定的,所以会出现很多冲突的场景,例如对通过一个顶点进行多次添加,删除不存在的边等等。在默认的DefaultLoadingVertexResolver实现中,对于下面这些场景会认为是“冲突”,然后会抛出异常:添加重复点:通常使用 addVertexRequest 添加点,而相同 ID 的点已经存在。

添加重复边:通常使用 addEdgeRequest 添加边时,而相同起点和终点的边已经存在;或者使用 addVertexRequest 添加点时,待添加点中存在重复边。

删除不存在的边:通常使用 removeEdgeRequest 删除边时,待删除的边不存在。

删除不存在的点:通常使用 removeVertexRequest 删除点时,待删除的点不存在。

发送消息到不存在的点:通常使用 sendMessage 发送消息时,目标点不存在。

用户自定义的Resolver中可以自行定义冲突场景,或者对上述冲突场景做其他处理。

SSSP_Split的例子

在graph提供的example中提供的三个例子都没有自定义resolver,也没有在迭代过程中改变图拓扑结构。下面这个例子是在原先最简单的例子SSSP(单源最短路径)的基础上增加了分裂顶点的功能,即在某轮迭代中发现某个顶点的出边数大于某个阈值时,将其分裂成两个顶点,这两个顶点之间的距离为0。
package com.test;

import java.io.IOException;
import java.util.Iterator;
import java.util.List;
import com.aliyun.odps.Record;
import com.aliyun.odps.graph.Combiner;
import com.aliyun.odps.graph.ComputeContext;
import com.aliyun.odps.graph.DefaultLoadingVertexResolver;
import com.aliyun.odps.graph.Edge;
import com.aliyun.odps.graph.GraphJob;
import com.aliyun.odps.graph.GraphLoader;
import com.aliyun.odps.graph.MutationContext;
import com.aliyun.odps.graph.Vertex;
import com.aliyun.odps.graph.VertexChanges;
import com.aliyun.odps.graph.VertexResolver;
import com.aliyun.odps.graph.WorkerContext;
import com.aliyun.odps.io.LongWritable;
import com.aliyun.odps.io.TableInfo;
import com.aliyun.odps.io.Text;
import com.aliyun.odps.io.WritableComparable;

public class SSSP_Split {

public static final String START_VERTEX = "sssp.start.vertex.id";
public static final String MAX_DEGREE = "sssp.vertex.max.degree";

public static class SSSPVertex extends
Vertex<LongWritable, LongWritable, LongWritable, LongWritable> {

private static long startVertexId = -1;
private static long STEP_BASE = 100;

public SSSPVertex() {
this.setValue(new LongWritable(Long.MAX_VALUE));
}

public boolean isStartVertex(
ComputeContext<LongWritable, LongWritable, LongWritable, LongWritable> context) {
if (startVertexId == -1) {
String s = context.getConfiguration().get(START_VERTEX);
startVertexId = Long.parseLong(s);
}
return getId().get() == startVertexId;
}

@Override
public void compute(
ComputeContext<LongWritable, LongWritable, LongWritable, LongWritable> context,
Iterable<LongWritable> messages) throws IOException {
long minDist = isStartVertex(context) ? 0 : Long.MAX_VALUE;

for (LongWritable msg : messages) {
if (msg.get() < minDist) {
minDist = msg.get();
}
}

if (minDist < this.getValue().get()) {
this.setValue(new LongWritable(minDist));
if (hasEdges()) {
for (Edge<LongWritable, LongWritable> e : this.getEdges()) {
context.sendMessage(e.getDestVertexId(), new LongWritable(minDist
+ e.getValue().get()));
}
}
} else {
voteToHalt();
}
// 这里执行分裂顶点的逻辑,当顶点的出边数大于阈值sssp.vertex.max.degree时执行分裂,
// 并且分裂行为只在前3轮发生.
if (this.getEdges().size() > context.getConfiguration().getInt(
MAX_DEGREE, Integer.MAX_VALUE)
&& context.getSuperstep() < 3) {
SSSPVertex splitVertex = new SSSPVertex();
// 分裂的顶点id为原id+100*2^迭代轮次,这样避免id出现冲突(初始顶点数小于100)
// 即顶点3在第0步时分裂出来顶点103,顶点103在第2轮时分裂出顶点503
splitVertex.setId(new LongWritable(getId().get()
+ (STEP_BASE << context.getSuperstep())));
splitVertex.setValue(getValue());
context.addVertexRequest(splitVertex);
// 添加原始顶点与分裂顶点之间的边,距离为0
context.addEdgeRequest(splitVertex.getId(),
new Edge<LongWritable, LongWritable>(this.getId(),
new LongWritable(0)));
context.addEdgeRequest(getId(), new Edge<LongWritable, LongWritable>(
splitVertex.getId(), new LongWritable(0)));
// 将原始顶点上一半的出边转移到分裂顶点上。
for (int i = 0; i < this.getEdges().size(); i++) {
if (i % 2 == 0) {
context.removeEdgeRequest(getId(), getEdges().get(i).getDestVertexId());
context.addEdgeRequest(splitVertex.getId(), getEdges().get(i));
}
}
}
}

@Override
public void cleanup(
WorkerContext<LongWritable, LongWritable, LongWritable, LongWritable> context)
throws IOException {
String edges = "";
for (int i =0;i<getEdges().size();i++){
edges+=getEdges().get(i).getDestVertexId()+":";
}
// 输出每个顶点的id,出边,和与目标顶点的距离
context.write(getId(), new Text(edges), getValue());
}
}

public static class MinLongCombiner extends
Combiner<LongWritable, LongWritable> {

@Override
public void combine(LongWritable vertexId, LongWritable combinedMessage,
LongWritable messageToCombine) throws IOException {
if (combinedMessage.get() > messageToCombine.get()) {
combinedMessage.set(messageToCombine.get());
}
}
}

public static class SSSPVertexReader extends
GraphLoader<LongWritable, LongWritable, LongWritable, LongWritable> {
@Override
public void load(
LongWritable recordNum,
Record record,
MutationContext<LongWritable, LongWritable, LongWritable, LongWritable> context)
throws IOException {
SSSPVertex vertex = new SSSPVertex();
vertex.setId((LongWritable) record.get(0));
String[] edges = record.get(1).toString().split(",");
for (int i = 0; i < edges.length; i++) {
String[] ss = edges[i].split(":");
vertex.addEdge(new LongWritable(Long.parseLong(ss[0])),
new LongWritable(Long.parseLong(ss[1])));
}
context.addVertexRequest(vertex);
}
}

// 这里定义computer阶段的resolver
public static class SSSPVertexResolver extends VertexResolver{
@Override
public Vertex resolve(WritableComparable vertexId, Vertex vertex,
VertexChanges vertexChanges, boolean hasMessages) throws IOException {
// 处理添加顶点的请求
if (vertexChanges.getAddedVertexList() != null
&& vertexChanges.getAddedVertexList().size() > 0) {
vertex = (Vertex) vertexChanges.getAddedVertexList().get(0);
}
// 处理添加边的请求
if (vertexChanges.getAddedEdgeList() != null
&& vertexChanges.getAddedEdgeList().size() > 0) {
for (Edge<LongWritable, LongWritable> edge : (List<Edge<LongWritable, LongWritable>>) (vertexChanges
.getAddedEdgeList())) {
vertex.addEdge(edge.getDestVertexId(), edge.getValue());
}
}
// 处理删除边的请求
if (vertexChanges.getRemovedEdgeList() != null
&& vertexChanges.getRemovedEdgeList().size() > 0) {
for (LongWritable removedDestVertex : (List<LongWritable>)vertexChanges.getRemovedEdgeList()) {
List<Edge<LongWritable, LongWritable>> edgeList = vertex.getEdges();
for (Iterator<Edge<LongWritable, LongWritable>> edges = edgeList.iterator(); edges.hasNext();) {
Edge<LongWritable, LongWritable> edge = edges.next();
if (edge.getDestVertexId().equals(removedDestVertex)) {
edges.remove();
}
}
}
}
// 处理删除顶点的请求
if (vertexChanges.getRemovedVertexCount() > 0) {
// do nothing
}
return vertex;
}

}
public static void main(String[] args) throws IOException {
if (args.length < 3) {
System.out.println("Usage: <startnode> <max degree> <input> <output>");
System.exit(-1);
}

GraphJob job = new GraphJob();
job.setGraphLoaderClass(SSSPVertexReader.class);
job.setVertexClass(SSSPVertex.class);
job.setCombinerClass(MinLongCombiner.class);
// 设置compute阶段的resolver
job.setComputingVertexResolverClass(SSSPVertexResolver.class);
job.set(START_VERTEX, args[0]);
job.set(MAX_DEGREE, args[1]);
job.addInput(new TableInfo(args[2]));
job.addOutput(new TableInfo(args[3]));

long startTime = System.currentTimeMillis();
job.run();
System.out.println("Job Finished in "
+ (System.currentTimeMillis() - startTime) / 1000.0 + " seconds");
}
}


输入表数据ssp_in:
1,"2:2,3:1,4:4,5:5"
2,"1:2,3:2,4:1,5:4"
3,"1:1,2:2,4:2,5:3"
4,"1:4,2:1,3:2,5:1"
5,"1:5,2:4,3:1,4:1"
输出表数据sssp_out:
102,2:1:4:,2
103,3:1:4:,1
1,3:5:101:,0
2,3:5:102:,2
101,1:2:4:,0
3,2:5:103:,1
4,2:5:104:,3
5,2:4:105:,4
104,4:1:3:,3
105,5:1:3:,4
输出数据中,分裂出来的点与源点(顶点103和顶点3)与目秒顶点的距离相同,两者实际仍然是同一个点。
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