centos7 安装R语言遇到的各种坑

第一步，可以前往官网网址https://www.r-project.org/下载最新的软件包，我的是R-3.2.3.tar.gz，属于radhat版本。

第二步，解压缩，我也是按照网上的指导将压缩包放到/root目录下，然后解压缩，并进入R-3.2.3目录。

第三步，开始安装R语言：

[root@localhost R-3.2.3]# ./configure

（1）问题1：R语言依赖gcc、glibc-headers、gcc-c++、gcc-gfortran，因此需要部署

[root@localhost R-3.2.3]#yum -y install gcc

[root@localhost R-3.2.3]#yum install glibc-headers

[root@localhost R-3.2.3]# yum install gcc-c++

[root@localhost R-3.2.3]#yum install gcc-gfortran

（2）问题2：R语言安装依赖openjdk

[root@localhost R-3.2.3]#yum install java-1.8.0-openjdk-*

注解：在安装过程中，如果上述软件包没有安装的话，会不断有warning或者error提示，并且会提示相应的关键字。

解决以上两个问题之后就可以顺利的执行安装了，详细过程如下：

[root@localhost R-3.2.3]# ./configure

checking build system type... x86_64-pc-linux-gnu

checking host system type... x86_64-pc-linux-gnu

loading site script './config.site'

loading build-specific script './config.site'

checking for pwd... /usr/bin/pwd

checking whether builddir is srcdir... yes

checking for working aclocal... missing

checking for working autoconf... missing

checking for working automake... missing

checking for working autoheader... missing

checking for gawk... gawk

checking whether ln -s works... yes

checking for bison... no

checking for byacc... no

checking for ar... ar

checking for a BSD-compatible install... /usr/bin/install -c

checking for sed... /usr/bin/sed

checking for which... /usr/bin/which

checking for less... /usr/bin/less

checking for gtar... /usr/bin/gtar

checking for tex... no

checking for pdftex... no

configure: WARNING: you cannot build PDF versions of the R manuals

checking for pdflatex... no

configure: WARNING: you cannot build PDF versions of vignettes and help pages

checking for makeindex... no

checking for texi2any... no

configure: WARNING: you cannot build info or HTML versions of the R manuals

checking for texi2dvi... no

checking for kpsewhich... no

checking for latex inconsolata package... checking for unzip... /usr/bin/unzip

checking for zip... /usr/bin/zip

checking for gzip... /usr/bin/gzip

checking for bzip2... /usr/bin/bzip2

checking for firefox... /usr/bin/firefox

using default browser ... /usr/bin/firefox

checking for acroread... no

checking for acroread4... no

checking for xdg-open... /usr/bin/xdg-open

checking for notangle... false

checking for realpath... /usr/bin/realpath

checking for pkg-config... /usr/bin/pkg-config

checking for gcc... gcc

checking whether the C compiler works... yes

checking for C compiler default output file name... a.out

checking for suffix of executables...

checking whether we are cross compiling... no

checking for suffix of object files... o

checking whether we are using the GNU C compiler... yes

checking whether gcc accepts -g... yes

checking for gcc option to accept ISO C89... none needed

checking how to run the C preprocessor... gcc -E

checking for grep that handles long lines and -e... /usr/bin/grep

checking for egrep... /usr/bin/grep -E

checking whether gcc needs -traditional... no

checking how to run the C preprocessor... gcc -E

checking for gfortran... gfortran

checking whether we are using the GNU Fortran 77 compiler... yes

checking whether gfortran accepts -g... yes

checking for g++... g++

checking whether we are using the GNU C++ compiler... yes

checking whether g++ accepts -g... yes

checking how to run the C++ preprocessor... g++ -E

checking whether __attribute__((visibility())) is supported... yes

checking whether gcc accepts -fvisibility... yes

checking whether gfortran accepts -fvisibility... yes

checking for ANSI C header files... yes

checking for sys/types.h... yes

checking for sys/stat.h... yes

checking for stdlib.h... yes

checking for string.h... yes

checking for memory.h... yes

checking for strings.h... yes

checking for inttypes.h... yes

checking for stdint.h... yes

checking for unistd.h... yes

checking minix/config.h usability... no

checking minix/config.h presence... no

checking for minix/config.h... no

checking whether it is safe to define __EXTENSIONS__... yes

checking for gcc... gcc

checking whether we are using the GNU Objective C compiler... no

checking whether gcc accepts -g... no

checking for Objective C++ compiler... trying some possibilities

checking whether g++ can compile ObjC++... no

checking whether  can compile ObjC++... no

no working ObjC++ compiler found

checking for a sed that does not truncate output... (cached) /usr/bin/sed

checking for fgrep... /usr/bin/grep -F

checking for ld used by gcc... /usr/bin/ld

checking if the linker (/usr/bin/ld) is GNU ld... yes

checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B

checking the name lister (/usr/bin/nm -B) interface... BSD nm

checking the maximum length of command line arguments... 1572864

checking whether the shell understands some XSI constructs... yes

checking whether the shell understands "+="... yes

checking for /usr/bin/ld option to reload object files... -r

checking for objdump... objdump

checking how to recognize dependent libraries... pass_all

checking for strip... strip

checking for ranlib... ranlib

checking command to parse /usr/bin/nm -B output from gcc object... ok

checking for dlfcn.h... yes

checking whether we are using the GNU C++ compiler... (cached) yes

checking whether g++ accepts -g... (cached) yes

checking how to run the C++ preprocessor... g++ -E

checking whether we are using the GNU Fortran 77 compiler... (cached) yes

checking whether gfortran accepts -g... (cached) yes

checking for objdir... .libs

checking if gcc supports -fno-rtti -fno-exceptions... no

checking for gcc option to produce PIC... -fPIC -DPIC

checking if gcc PIC flag -fPIC -DPIC works... yes

checking if gcc static flag -static works... no

checking if gcc supports -c -o file.o... yes

checking if gcc supports -c -o file.o... (cached) yes

checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes

checking whether -lc should be explicitly linked in... no

checking dynamic linker characteristics... GNU/Linux ld.so

checking how to hardcode library paths into programs... immediate

checking whether stripping libraries is possible... yes

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... no

checking for ld used by g++... /usr/bin/ld

checking if the linker (/usr/bin/ld) is GNU ld... yes

checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes

checking for g++ option to produce PIC... -fPIC -DPIC

checking if g++ PIC flag -fPIC -DPIC works... yes

checking if g++ static flag -static works... no

checking if g++ supports -c -o file.o... yes

checking if g++ supports -c -o file.o... (cached) yes

checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes

checking dynamic linker characteristics... GNU/Linux ld.so

checking how to hardcode library paths into programs... immediate

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... no

checking for gfortran option to produce PIC... -fPIC

checking if gfortran PIC flag -fPIC works... yes

checking if gfortran static flag -static works... no

checking if gfortran supports -c -o file.o... yes

checking if gfortran supports -c -o file.o... (cached) yes

checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes

checking dynamic linker characteristics... GNU/Linux ld.so

checking how to hardcode library paths into programs... immediate

checking for cos in -lm... yes

checking for sin in -lm... yes

checking for dlopen in -ldl... yes

checking readline/history.h usability... yes

checking readline/history.h presence... yes

checking for readline/history.h... yes

checking readline/readline.h usability... yes

checking readline/readline.h presence... yes

checking for readline/readline.h... yes

checking for rl_callback_read_char in -lreadline... yes

checking for history_truncate_file... yes

checking whether rl_completion_matches exists and is declared... yes

checking for A
17c75
NSI C header files... (cached) yes

checking for dirent.h that defines DIR... yes

checking for library containing opendir... none required

checking for sys/wait.h that is POSIX.1 compatible... yes

checking arpa/inet.h usability... yes

checking arpa/inet.h presence... yes

checking for arpa/inet.h... yes

checking dl.h usability... no

checking dl.h presence... no

checking for dl.h... no

checking for dlfcn.h... (cached) yes

checking elf.h usability... yes

checking elf.h presence... yes

checking for elf.h... yes

checking features.h usability... yes

checking features.h presence... yes

checking for features.h... yes

checking fcntl.h usability... yes

checking fcntl.h presence... yes

checking for fcntl.h... yes

checking floatingpoint.h usability... no

checking floatingpoint.h presence... no

checking for floatingpoint.h... no

checking fpu_control.h usability... yes

checking fpu_control.h presence... yes

checking for fpu_control.h... yes

checking glob.h usability... yes

checking glob.h presence... yes

checking for glob.h... yes

checking grp.h usability... yes

checking grp.h presence... yes

checking for grp.h... yes

checking langinfo.h usability... yes

checking langinfo.h presence... yes

checking for langinfo.h... yes

checking netdb.h usability... yes

checking netdb.h presence... yes

checking for netdb.h... yes

checking netinet/in.h usability... yes

checking netinet/in.h presence... yes

checking for netinet/in.h... yes

checking pwd.h usability... yes

checking pwd.h presence... yes

checking for pwd.h... yes

checking sched.h usability... yes

checking sched.h presence... yes

checking for sched.h... yes

checking for strings.h... (cached) yes

checking sys/param.h usability... yes

checking sys/param.h presence... yes

checking for sys/param.h... yes

checking sys/resource.h usability... yes

checking sys/resource.h presence... yes

checking for sys/resource.h... yes

checking sys/select.h usability... yes

checking sys/select.h presence... yes

checking for sys/select.h... yes

checking sys/socket.h usability... yes

checking sys/socket.h presence... yes

checking for sys/socket.h... yes

checking for sys/stat.h... (cached) yes

checking sys/time.h usability... yes

checking sys/time.h presence... yes

checking for sys/time.h... yes

checking sys/times.h usability... yes

checking sys/times.h presence... yes

checking for sys/times.h... yes

checking sys/utsname.h usability... yes

checking sys/utsname.h presence... yes

checking for sys/utsname.h... yes

checking for unistd.h... (cached) yes

checking utime.h usability... yes

checking utime.h presence... yes

checking for utime.h... yes

checking stdalign.h usability... yes

checking stdalign.h presence... yes

checking for stdalign.h... yes

checking errno.h usability... yes

checking errno.h presence... yes

checking for errno.h... yes

checking for inttypes.h... (cached) yes

checking limits.h usability... yes

checking limits.h presence... yes

checking for limits.h... yes

checking locale.h usability... yes

checking locale.h presence... yes

checking for locale.h... yes

checking stdarg.h usability... yes

checking stdarg.h presence... yes

checking for stdarg.h... yes

checking stdbool.h usability... yes

checking stdbool.h presence... yes

checking for stdbool.h... yes

checking for stdint.h... (cached) yes

checking for string.h... (cached) yes

checking whether setjmp.h is POSIX.1 compatible... yes

checking whether sigsetjmp is declared... yes

checking whether siglongjmp is declared... yes

checking for GNU C library with version >= 2... yes

checking return type of signal handlers... void

checking for uint64_t... yes

checking for int64_t... yes

checking for int_fast64_t... yes

checking for pid_t... yes

checking for size_t... yes

checking whether SIZE_MAX is declared... yes

checking for blkcnt_t... yes

checking for type of socket length... socklen_t *

checking for stack_t... yes

checking for intptr_t... yes

checking for uintptr_t... yes

checking whether byte ordering is bigendian... no

checking for an ANSI C-conforming const... yes

checking for gcc option to accept ISO C99... -std=gnu99

checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99

checking for inline... inline

checking size of int... 4

checking size of long... 8

checking size of long long... 8

checking size of double... 8

checking size of size_t... 8

checking size of long double... 16

checking whether we can compute C Make dependencies... yes, using $(CC) -MM

checking whether gcc -std=gnu99 supports -c -o FILE.lo... yes

checking for gcc -std=gnu99 option to support OpenMP... -fopenmp

checking how to get verbose linking output from gfortran... -v

b/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran -lm -lquadmath

checking how to get verbose linking output from gcc -std=gnu99... -v

./lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgcc_s

checking for dummy main to link with Fortran 77 libraries... none

checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore

checking whether gfortran appends underscores to external names... yes

checking whether gfortran appends extra underscores to external names... no

checking whether mixed C/Fortran code can be run... yes

checking whether gfortran and gcc -std=gnu99 agree on int and double... yes

checking whether gfortran and gcc -std=gnu99 agree on double complex... yes

checking for gfortran option to support OpenMP... -fopenmp

checking whether g++ accepts -M for generating dependencies... yes

checking for g++ option to support OpenMP... -fopenmp

checking whether we can compute ObjC Make dependencies... no

checking whether C runtime needs -D__NO_MATH_INLINES... no

checking for xmkmf... no

checking whether g++  supports C++11 features by default... no

checking whether g++  supports C++11 features with -std=c++11... yes

checking for off_t... yes

checking for working alloca.h... yes

checking for alloca... yes

checking whether alloca is declared... yes

checking whether expm1 exists and is declared... yes

checking whether hypot exists and is declared... yes

checking whether log1p exists and is declared... yes

checking whether log1pl exists and is declared... yes

checking whether log2 exists and is declared... yes

checking whether log10 exists and is declared... yes

checking whether nearbyint exists and is declared... yes

checking whether nearbyintl exists and is declared... yes

checking whether powl exists and is declared... yes

checking whether rint exists and is declared... yes

checking whether rintl exists and is declared... yes

checking whether va_copy exists and is declared... yes

checking for isblank... yes

checking sunmath.h usability... no

checking sunmath.h presence... no

checking for sunmath.h... no

checking for cospi in -lsunmath... no

checking for atanpi... no

checking for atan2pi... no

checking for cospi... no

checking for exp10... yes

checking for pown... no

checking for sinpi... no

checking for tanpi... no

checking for fseeko... yes

checking for ftello... yes

checking for matherr... yes

checking whether fcntl exists and is declared... yes

checking whether getgrgid exists and is declared... yes

checking whether getpwuid exists and is declared... yes

checking whether kill exists and is declared... yes

checking whether sigaction exists and is declared... yes

checking whether sigaltstack exists and is declared... yes

checking whether sigemptyset exists and is declared... yes

checking whether fdopen exists and is declared... yes

checking whether popen exists and is declared... yes

checking whether setenv exists and is declared... yes

checking whether unsetenv exists and is declared... yes

checking whether getrlimit exists and is declared... yes

checking whether getrusage exists and is declared... yes

checking whether getpriority exists and is declared... yes

checking whether chmod exists and is declared... yes

checking whether mkfifo exists and is declared... yes

checking whether stat exists and is declared... yes

checking whether umask exists and is declared... yes

checking whether gettimeofday exists and is declared... yes

checking whether utimes exists and is declared... yes

checking whether times exists and is declared... yes

checking whether gmtime_r exists and is declared... yes

checking whether localtime_r exists and is declared... yes

checking whether nl_langinfo exists and is declared... yes

checking whether access exists and is declared... yes

checking whether chdir exists and is declared... yes

checking whether execv exists and is declared... yes

checking whether ftruncate exists and is declared... yes

checking whether getcwd exists and is declared... yes

checking whether geteuid exists and is declared... yes

checking whether getuid exists and is declared... yes

checking whether link exists and is declared... yes

checking whether readlink exists and is declared... yes

checking whether symlink exists and is declared... yes

checking whether sysconf exists and is declared... yes

checking whether sched_setaffinity exists and is declared... yes

checking whether sched_getaffinity exists and is declared... yes

checking whether utime exists and is declared... yes

checking for clock_gettime in -lrt... yes

checking whether clock_gettime exists and is declared... yes

checking whether timespec_get exists and is declared... yes

checking for putenv... yes

checking whether putenv is declared... yes

checking for vasprintf... yes

checking whether vasprintf is declared... yes

checking for mempcpy... yes

checking for realpath... yes

checking whether realpath is declared... yes

checking whether glob exists and is declared... yes

checking for isnan... yes

checking whether isfinite is declared... yes

checking whether isnan is declared... yes

checking whether you have IEEE 754 floating-point arithmetic... yes

checking whether putenv("FOO") can unset an environment variable... yes

checking whether putenv("FOO=") can unset an environment variable... no

checking for nl_langinfo and CODESET... yes

checking for mkdtemp... yes

checking for strdup... yes

checking for strncasecmp... yes

checking whether mkdtemp is declared... yes

checking whether strdup is declared... yes

checking whether strncasecmp is declared... yes

checking for library containing connect... none required

checking for library containing gethostbyname... none required

checking for library containing xdr_string... none required

checking for __setfpucw... no

checking for working calloc... yes

checking for working isfinite... yes

checking for working log1p... yes

checking whether ftell works correctly on files opened for append... yes

checking for working sigaction... yes

checking whether mktime sets errno... no

checking whether mktime works correctly outside 1902-2037... yes

checking complex.h usability... yes

checking complex.h presence... yes

checking for complex.h... yes

checking for double complex... yes

checking whether C99 double complex is supported... yes

checking whether cabs exists and is declared... yes

checking whether carg exists and is declared... yes

checking whether cexp exists and is declared... yes

checking whether clog exists and is declared... yes

checking whether csqrt exists and is declared... yes

checking whether cpow exists and is declared... yes

checking whether ccos exists and is declared... yes

checking whether csin exists and is declared... yes

checking whether ctan exists and is declared... yes

checking whether cacos exists and is declared... yes

checking whether casin exists and is declared... yes

checking whether catan exists and is declared... yes

checking whether ccosh exists and is declared... yes

checking whether csinh exists and is declared... yes

checking whether ctanh exists and is declared... yes

checking whether 'struct tm' includes tm_zone... yes

checking whether 'struct tm' includes tm_gmtoff... yes

checking iconv.h usability... yes

checking iconv.h presence... yes

checking for iconv.h... yes

checking for iconv... yes

checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes

checking for iconvlist... no

checking for iconv... yes

checking for iconv declaration...

e_t *outbytesleft);

checking wchar.h usability... yes

checking wchar.h presence... yes

checking for wchar.h... yes

checking wctype.h usability... yes

checking wctype.h presence... yes

checking for wctype.h... yes

checking whether mbrtowc exists and is declared... yes

checking whether wcrtomb exists and is declared... yes

checking whether wcscoll exists and is declared... yes

checking whether wcsftime exists and is declared... yes

checking whether wcstod exists and is declared... yes

checking whether mbstowcs exists and is declared... yes

checking whether wcstombs exists and is declared... yes

checking whether wctrans exists and is declared... yes

checking whether iswblank exists and is declared... yes

checking whether wctype exists and is declared... yes

checking whether iswctype exists and is declared... yes

checking for wctrans_t... yes

checking for mbstate_t... yes

checking for ICU... no

checking for X... libraries , headers

checking for gethostbyname... yes

checking for connect... yes

checking for remove... yes

checking for shmat... yes

checking for IceConnectionNumber in -lICE... yes

checking X11/Intrinsic.h usability... yes

checking X11/Intrinsic.h presence... yes

checking for X11/Intrinsic.h... yes

checking for XtToolkitInitialize in -lXt... yes

using X11 ... yes

checking for KeySym... yes

checking X11/Xmu/Atoms.h usability... no

checking X11/Xmu/Atoms.h presence... no

checking for X11/Xmu/Atoms.h... no

checking whether pkg-config knows about cairo and pango... no

checking whether pkg-config knows about cairo... no

checking for tclConfig.sh... no

checking for tclConfig.sh in library (sub)directories... no

checking for tkConfig.sh... no

checking for tkConfig.sh in library (sub)directories... no

checking for tcl.h... no

checking for BSD networking... yes

checking if jpeglib version >= 6b... yes

checking for jpeg_destroy_compress in -ljpeg... yes

checking for main in -lz... no

checking tiffio.h usability... no

checking tiffio.h presence... no

checking for tiffio.h... no

checking rpc/types.h usability... yes

checking rpc/types.h presence... yes

checking for rpc/types.h... yes

checking for rpc/xdr.h... yes

checking for XDR support... yes

checking for inflateInit2_ in -lz... no

checking whether zlib support needs to be compiled... yes

checking mmap support for zlib... yes

checking for BZ2_bzlibVersion in -lbz2... no

checking whether bzip2 support needs to be compiled... yes

checking for lzma_version_number in -llzma... no

checking for pcre_fullinfo in -lpcre... no

checking whether PCRE support needs to be compiled... yes

checking for curl-config... no

checking if libcurl version >= 7.28.0... no

checking whether leap seconds are treated according to POSIX... yes

checking for inline... inline

checking for sys/time.h... (cached) yes

checking for stdlib.h... (cached) yes

checking for unistd.h... (cached) yes

checking for sys/param.h... (cached) yes

checking for struct stat.st_atim.tv_nsec... yes

checking whether struct stat.st_atim is of type struct timespec... yes

checking for setitimer... yes

checking for special C compiler options needed for large files... no

checking for _FILE_OFFSET_BITS value needed for large files... no

checking for _LARGEFILE_SOURCE value needed for large files... no

checking whether KERN_USRSTACK sysctl is supported... no

checking for visible __lib_stack_end... yes

checking for lpr... lpr

checking for paperconf... false

checking for gfortran... gfortran

checking whether we are using the GNU Fortran compiler... yes

checking whether gfortran accepts -g... yes

checking whether we are using the GNU Fortran compiler... (cached) yes

checking whether gfortran accepts -g... (cached) yes

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... no

checking for gfortran option to produce PIC... -fPIC

checking if gfortran PIC flag -fPIC works... yes

checking if gfortran static flag -static works... no

checking if gfortran supports -c -o file.o... yes

checking if gfortran supports -c -o file.o... (cached) yes

checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes

checking dynamic linker characteristics... GNU/Linux ld.so

checking how to hardcode library paths into programs... immediate

checking for Fortran flag to compile .f90 files... none

checking for Fortran flag to compile .f95 files... none

checking for gfortran option to support OpenMP... -fopenmp

checking for recommended packages... yes

checking whether NLS is requested... yes

Configuring src/extra/intl directory

checking for a thread-safe mkdir -p... /usr/bin/mkdir -p

checking whether we are using the GNU C Library 2 or newer... yes

checking for ranlib... (cached) ranlib

checking for simple visibility declarations... yes

checking for stdint.h... yes

checking for getpagesize... yes

checking for working mmap... yes

checking whether integer division by zero raises SIGFPE... yes

checking for inttypes.h... yes

checking for unsigned long long int... yes

checking for inttypes.h... (cached) yes

checking whether the inttypes.h PRIxNN macros are broken... no

checking for ld used by gcc -std=gnu99... /usr/bin/ld

checking if the linker (/usr/bin/ld) is GNU ld... yes

checking for shared library run path origin... done

checking whether imported symbols can be declared weak... yes

checking for multithread API to use... none

checking argz.h usability... yes

checking argz.h presence... yes

checking for argz.h... yes

checking for inttypes.h... (cached) yes

checking for limits.h... (cached) yes

checking for unistd.h... (cached) yes

checking for sys/param.h... (cached) yes

checking for getcwd... yes

checking for getegid... yes

checking for geteuid... yes

checking for getgid... yes

checking for getuid... yes

checking for mempcpy... (cached) yes

checking for munmap... yes

checking for stpcpy... yes

checking for strcasecmp... yes

checking for strdup... (cached) yes

checking for strtoul... yes

checking for tsearch... yes

checking for argz_count... yes

checking for argz_stringify... yes

checking for argz_next... yes

checking for __fsetlocking... yes

checking whether feof_unlocked is declared... yes

checking whether fgets_unlocked is declared... yes

checking for iconv... (cached) yes

checking for iconv declaration... (cached)

e_t *outbytesleft);

checking for NL_LOCALE_NAME macro... yes

checking for bison... no

checking for long long int... yes

checking for long double... yes

checking for wchar_t... yes

checking for wint_t... yes

checking for intmax_t... yes

checking whether printf() supports POSIX/XSI format strings... yes

checking whether we are using the GNU C Library 2.1 or newer... yes

checking for stdint.h... (cached) yes

checking for SIZE_MAX... yes

checking for stdint.h... (cached) yes

checking for CFPreferencesCopyAppValue... no

checking for CFLocaleCopyCurrent... no

checking for ptrdiff_t... yes

checking stddef.h usability... yes

checking stddef.h presence... yes

checking for stddef.h... yes

checking for stdlib.h... (cached) yes

checking for string.h... (cached) yes

checking for asprintf... yes

checking for fwprintf... yes

checking for putenv... (cached) yes

checking for setenv... yes

checking for setlocale... yes

checking for snprintf... yes

checking for wcslen... yes

checking whether _snprintf is declared... no

checking whether _snwprintf is declared... no

checking whether getc_unlocked is declared... yes

checking for nl_langinfo and CODESET... (cached) yes

checking for LC_MESSAGES... yes

checking for CFPreferencesCopyAppValue... (cached) no

checking for CFLocaleCopyCurrent... (cached) no

checking whether included gettext is requested... no

checking for GNU gettext in libc... yes

checking whether to use NLS... yes

checking where the gettext function comes from... libc

Finished configuring src/extra/intl directory

using as R_SHELL for scripts ... /bin/sh

configure: creating ./config.status

config.status: creating Makeconf

config.status: creating Makefile

config.status: creating doc/Makefile

config.status: creating doc/html/Makefile

config.status: creating doc/manual/Makefile

config.status: creating etc/Makefile

config.status: creating etc/Makeconf

config.status: creating etc/Renviron

config.status: creating etc/javaconf

config.status: creating etc/ldpaths

config.status: creating m4/Makefile

config.status: creating po/Makefile

config.status: creating share/Makefile

config.status: creating src/Makefile

config.status: creating src/appl/Makefile

config.status: creating src/extra/Makefile

config.status: creating src/extra/blas/Makefile

config.status: creating src/extra/bzip2/Makefile

config.status: creating src/extra/intl/Makefile

config.status: creating src/extra/pcre/Makefile

config.status: creating src/extra/tre/Makefile

config.status: creating src/extra/tzone/Makefile

config.status: creating src/extra/xdr/Makefile

config.status: creating src/extra/xz/Makefile

config.status: creating src/extra/zlib/Makefile

config.status: creating src/include/Makefile

config.status: creating src/include/Rmath.h0

config.status: creating src/include/R_ext/Makefile

config.status: creating src/library/Recommended/Makefile

config.status: creating src/library/Makefile

config.status: creating src/library/base/DESCRIPTION

config.status: creating src/library/base/Makefile

config.status: creating src/library/compiler/DESCRIPTION

config.status: creating src/library/compiler/Makefile

config.status: creating src/library/datasets/DESCRIPTION

config.status: creating src/library/datasets/Makefile

config.status: creating src/library/graphics/DESCRIPTION

config.status: creating src/library/graphics/Makefile

config.status: creating src/library/graphics/src/Makefile

config.status: creating src/library/grDevices/DESCRIPTION

config.status: creating src/library/grDevices/Makefile

config.status: creating src/library/grDevices/src/Makefile

config.status: creating src/library/grDevices/src/cairo/Makefile

config.status: creating src/library/grid/DESCRIPTION

config.status: creating src/library/grid/Makefile

config.status: creating src/library/grid/src/Makefile

config.status: creating src/library/methods/DESCRIPTION

config.status: creating src/library/methods/Makefile

config.status: creating src/library/methods/src/Makefile

config.status: creating src/library/parallel/DESCRIPTION

config.status: creating src/library/parallel/Makefile

config.status: creating src/library/parallel/src/Makefile

config.status: creating src/library/profile/Makefile

config.status: creating src/library/stats/DESCRIPTION

config.status: creating src/library/stats/Makefile

config.status: creating src/library/stats/src/Makefile

config.status: creating src/library/stats4/DESCRIPTION

config.status: creating src/library/stats4/Makefile

config.status: creating src/library/splines/DESCRIPTION

config.status: creating src/library/splines/Makefile

config.status: creating src/library/splines/src/Makefile

config.status: creating src/library/tcltk/DESCRIPTION

config.status: creating src/library/tcltk/Makefile

config.status: creating src/library/tcltk/src/Makefile

config.status: creating src/library/tools/DESCRIPTION

config.status: creating src/library/tools/Makefile

config.status: creating src/library/tools/src/Makefile

config.status: creating src/library/translations/DESCRIPTION

config.status: creating src/library/translations/Makefile

config.status: creating src/library/utils/DESCRIPTION

config.status: creating src/library/utils/Makefile

config.status: creating src/library/utils/src/Makefile

config.status: creating src/main/Makefile

config.status: creating src/modules/Makefile

config.status: creating src/modules/X11/Makefile

config.status: creating src/modules/internet/Makefile

config.status: creating src/modules/lapack/Makefile

config.status: creating src/nmath/Makefile

config.status: creating src/nmath/standalone/Makefile

config.status: creating src/scripts/Makefile

config.status: creating src/scripts/R.sh

config.status: creating src/scripts/Rcmd

config.status: creating src/scripts/f77_f2c

config.status: creating src/scripts/javareconf

config.status: creating src/scripts/mkinstalldirs

config.status: creating src/scripts/pager

config.status: creating src/scripts/rtags

config.status: creating src/unix/Makefile

config.status: creating tests/Makefile

config.status: creating tests/Embedding/Makefile

config.status: creating tests/Examples/Makefile

config.status: creating tools/Makefile

config.status: creating src/include/config.h

config.status: src/include/config.h is unchanged

config.status: executing libtool commands

config.status: executing stamp-h commands

R is now configured for x86_64-pc-linux-gnu

  Source directory:          .

  Installation directory:    /usr/local

  C compiler:                gcc -std=gnu99  -g -O2

  Fortran 77 compiler:       gfortran  -g -O2

  C++ compiler:              g++  -g -O2

  C++ 11 compiler:           g++  -std=c++11 -g -O2

  Fortran 90/95 compiler:    gfortran -g -O2

  Obj-C compiler:          

  Interfaces supported:      X11

  External libraries:        readline

  Additional capabilities:   JPEG, NLS

  Options enabled:           shared BLAS, R profiling

  Capabilities skipped:      PNG, TIFF, cairo, ICU

  Options not enabled:       memory profiling

  Recommended packages:      yes
//忽略此处告警

configure: WARNING: you cannot build info or HTML versions of the R manuals

configure: WARNING: you cannot build PDF versions of the R manuals

configure: WARNING: you cannot build PDF versions of vignettes and help pages
[root@localhost R-3.2.3]# make

make[1]: Entering directory `/root/R-3.2.3/m4'

make[1]: Nothing to be done for `R'.

make[1]: Leaving directory `/root/R-3.2.3/m4'

make[1]: Entering directory `/root/R-3.2.3/tools'

make[1]: Nothing to be done for `R'.

make[1]: Leaving directory `/root/R-3.2.3/tools'

make[1]: Entering directory `/root/R-3.2.3/doc'

make[2]: Entering directory `/root/R-3.2.3/doc/html'

make[2]: Leaving directory `/root/R-3.2.3/doc/html'

make[2]: Entering directory `/root/R-3.2.3/doc/manual'

make[2]: Nothing to be done for `R'.

make[2]: Leaving directory `/root/R-3.2.3/doc/manual'

make[1]: Leaving directory `/root/R-3.2.3/doc'

make[1]: Entering directory `/root/R-3.2.3/etc'

make[1]: Leaving directory `/root/R-3.2.3/etc'

make[1]: Entering directory `/root/R-3.2.3/share'

make[1]: Leaving directory `/root/R-3.2.3/share'

make[1]: Entering directory `/root/R-3.2.3/src'

make[2]: Entering directory `/root/R-3.2.3/src/scripts'

creating src/scripts/R.fe

make[3]: Entering directory `/root/R-3.2.3/src/scripts'

make[3]: Leaving directory `/root/R-3.2.3/src/scripts'

make[2]: Leaving directory `/root/R-3.2.3/src/scripts'

make[2]: Entering directory `/root/R-3.2.3/src/include'

config.status: creating src/include/config.h

config.status: src/include/config.h is unchanged

Rmath.h is unchanged

make[3]: Entering directory `/root/R-3.2.3/src/include/R_ext'

make[3]: Nothing to be done for `R'.

make[3]: Leaving directory `/root/R-3.2.3/src/include/R_ext'

make[2]: Leaving directory `/root/R-3.2.3/src/include'

make[2]: Entering directory `/root/R-3.2.3/src/extra'

make[3]: Entering directory `/root/R-3.2.3/src/extra/blas'

make[4]: Entering directory `/root/R-3.2.3/src/extra/blas'

make[4]: `libRblas.so' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/blas'

make[4]: Entering directory `/root/R-3.2.3/src/extra/blas'

/root/R-3.2.3/lib/libRblas.so is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/extra/blas'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/blas'

make[3]: Entering directory `/root/R-3.2.3/src/extra/bzip2'

make[4]: Entering directory `/root/R-3.2.3/src/extra/bzip2'

make[4]: `libbz2.a' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/bzip2'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/bzip2'

make[3]: Entering directory `/root/R-3.2.3/src/extra/pcre'

make[4]: Entering directory `/root/R-3.2.3/src/extra/pcre'

make[4]: Leaving directory `/root/R-3.2.3/src/extra/pcre'

make[4]: Entering directory `/root/R-3.2.3/src/extra/pcre'

make[4]: `libpcre.a' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/pcre'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/pcre'

make[3]: Entering directory `/root/R-3.2.3/src/extra/zlib'

make[4]: Entering directory `/root/R-3.2.3/src/extra/zlib'

make[4]: `libz.a' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/zlib'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/zlib'

make[3]: Entering directory `/root/R-3.2.3/src/extra/tre'

make[4]: Entering directory `/root/R-3.2.3/src/extra/tre'

make[4]: Leaving directory `/root/R-3.2.3/src/extra/tre'

make[4]: Entering directory `/root/R-3.2.3/src/extra/tre'

make[4]: `libtre.a' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/tre'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/tre'

make[3]: Entering directory `/root/R-3.2.3/src/extra/xz'

make[4]: Entering directory `/root/R-3.2.3/src/extra/xz'

make[4]: `liblzma.a' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/extra/xz'

make[3]: Leaving directory `/root/R-3.2.3/src/extra/xz'

make[2]: Leaving directory `/root/R-3.2.3/src/extra'

make[2]: Entering directory `/root/R-3.2.3/src/appl'

make[3]: Entering directory `/root/R-3.2.3/src/appl'

make[3]: `libappl.a' is up to date.

make[3]: Leaving directory `/root/R-3.2.3/src/appl'

make[2]: Leaving directory `/root/R-3.2.3/src/appl'

make[2]: Entering directory `/root/R-3.2.3/src/nmath'

make[3]: Entering directory `/root/R-3.2.3/src/nmath'

make[3]: `libnmath.a' is up to date.

make[3]: Leaving directory `/root/R-3.2.3/src/nmath'

make[2]: Leaving directory `/root/R-3.2.3/src/nmath'

make[2]: Entering directory `/root/R-3.2.3/src/unix'

make[3]: Entering directory `/root/R-3.2.3/src/unix'

make[3]: `libunix.a' is up to date.

make[3]: Leaving directory `/root/R-3.2.3/src/unix'

make[3]: Entering directory `/root/R-3.2.3/src/unix'

   -g -O2  -L/usr/local/lib64 -DR_HOME='"/root/R-3.2.3"' \

  -o Rscript ./Rscript.c

make[3]: Leaving directory `/root/R-3.2.3/src/unix'

make[2]: Leaving directory `/root/R-3.2.3/src/unix'

make[2]: Entering directory `/root/R-3.2.3/src/main'

make[3]: Entering directory `/root/R-3.2.3/src/main'

make[4]: Entering directory `/root/R-3.2.3/src/main'

/root/R-3.2.3/bin/exec/R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/main'

make[3]: Leaving directory `/root/R-3.2.3/src/main'

make[2]: Leaving directory `/root/R-3.2.3/src/main'

make[2]: Entering directory `/root/R-3.2.3/src/modules'

make[3]: Entering directory `/root/R-3.2.3/src/modules/internet'

make[4]: Entering directory `/root/R-3.2.3/src/modules/internet'

make[4]: `internet.so' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/modules/internet'

make[3]: Leaving directory `/root/R-3.2.3/src/modules/internet'

make[3]: Entering directory `/root/R-3.2.3/src/modules/lapack'

make[4]: Entering directory `/root/R-3.2.3/src/modules/lapack'

make[4]: `libRlapack.so' is up to date.

/root/R-3.2.3/lib/libRlapack.so is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/modules/lapack'

make[4]: Entering directory `/root/R-3.2.3/src/modules/lapack'

make[4]: `lapack.so' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/modules/lapack'

make[3]: Leaving directory `/root/R-3.2.3/src/modules/lapack'

make[3]: Entering directory `/root/R-3.2.3/src/modules/X11'

make[4]: Entering directory `/root/R-3.2.3/src/modules/X11'

make[4]: `R_X11.so' is up to date.

make[4]: `R_de.so' is up to date.

make[4]: Leaving directory `/root/R-3.2.3/src/modules/X11'

make[4]: Entering directory `/root/R-3.2.3/src/modules/X11'

/root/R-3.2.3/modules/R_X11.so is unchanged

/root/R-3.2.3/modules/R_de.so is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/modules/X11'

make[3]: Leaving directory `/root/R-3.2.3/src/modules/X11'

make[2]: Leaving directory `/root/R-3.2.3/src/modules'

make[2]: Entering directory `/root/R-3.2.3/src/library'

make[3]: Entering directory `/root/R-3.2.3/src/library/profile'

building system startup profile

make[3]: Leaving directory `/root/R-3.2.3/src/library/profile'

make[3]: Entering directory `/root/R-3.2.3/src/library/translations'

building package 'translations'

make[4]: Entering directory `/root/R-3.2.3/src/library/translations'

make[4]: Leaving directory `/root/R-3.2.3/src/library/translations'

make[3]: Leaving directory `/root/R-3.2.3/src/library/translations'

make[3]: Entering directory `/root/R-3.2.3/src/library/base'

building package 'base'

make[4]: Entering directory `/root/R-3.2.3/src/library/base'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/base'

make[3]: Leaving directory `/root/R-3.2.3/src/library/base'

make[3]: Entering directory `/root/R-3.2.3/src/library/tools'

building package 'tools'

make[4]: Entering directory `/root/R-3.2.3/src/library/tools'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/tools'

make[4]: Entering directory `/root/R-3.2.3/src/library/tools'

make[5]: Entering directory `/root/R-3.2.3/src/library/tools/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/tools/src'

../../../../library/tools/libs/tools.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/tools/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/tools/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/tools'

make[4]: Entering directory `/root/R-3.2.3/src/library/tools'

installing 'sysdata.rda'

make[4]: Leaving directory `/root/R-3.2.3/src/library/tools'

make[3]: Leaving directory `/root/R-3.2.3/src/library/tools'

make[3]: Entering directory `/root/R-3.2.3/src/library/compiler'

building package 'compiler'

make[4]: Entering directory `/root/R-3.2.3/src/library/compiler'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/compiler'

make[4]: Entering directory `/root/R-3.2.3/src/library/compiler'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/compiler'

make[3]: Leaving directory `/root/R-3.2.3/src/library/compiler'

make[3]: Entering directory `/root/R-3.2.3/src/library/base'

make[3]: Nothing to be done for `mklazycomp'.

make[3]: Leaving directory `/root/R-3.2.3/src/library/base'

make[3]: Entering directory `/root/R-3.2.3/src/library/tools'

make[3]: Nothing to be done for `mklazycomp'.

make[3]: Leaving directory `/root/R-3.2.3/src/library/tools'

make[3]: Entering directory `/root/R-3.2.3/src/library/utils'

building package 'utils'

make[4]: Entering directory `/root/R-3.2.3/src/library/utils'

all.R is unchanged

make[4]: Nothing to be done for `iconvlist'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/utils'

make[4]: Entering directory `/root/R-3.2.3/src/library/utils'

make[5]: Entering directory `/root/R-3.2.3/src/library/utils/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/utils/src'

../../../../library/utils/libs/utils.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/utils/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/utils/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/utils'

make[4]: Entering directory `/root/R-3.2.3/src/library/utils'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/utils'

make[3]: Leaving directory `/root/R-3.2.3/src/library/utils'

make[3]: Entering directory `/root/R-3.2.3/src/library/grDevices'

building package 'grDevices'

make[4]: Entering directory `/root/R-3.2.3/src/library/grDevices'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/grDevices'

make[4]: Entering directory `/root/R-3.2.3/src/library/grDevices'

make[5]: Entering directory `/root/R-3.2.3/src/library/grDevices/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/grDevices/src'

../../../../library/grDevices/libs/grDevices.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/grDevices/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/grDevices/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/grDevices'

make[4]: Entering directory `/root/R-3.2.3/src/library/grDevices'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/grDevices'

make[3]: Leaving directory `/root/R-3.2.3/src/library/grDevices'

make[3]: Entering directory `/root/R-3.2.3/src/library/graphics'

building package 'graphics'

make[4]: Entering directory `/root/R-3.2.3/src/library/graphics'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/graphics'

make[4]: Entering directory `/root/R-3.2.3/src/library/graphics'

make[5]: Entering directory `/root/R-3.2.3/src/library/graphics/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/graphics/src'

../../../../library/graphics/libs/graphics.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/graphics/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/graphics/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/graphics'

make[4]: Entering directory `/root/R-3.2.3/src/library/graphics'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/graphics'

make[3]: Leaving directory `/root/R-3.2.3/src/library/graphics'

make[3]: Entering directory `/root/R-3.2.3/src/library/stats'

building package 'stats'

make[4]: Entering directory `/root/R-3.2.3/src/library/stats'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/stats'

make[4]: Entering directory `/root/R-3.2.3/src/library/stats'

make[5]: Entering directory `/root/R-3.2.3/src/library/stats/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/stats/src'

../../../../library/stats/libs/stats.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/stats/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/stats/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/stats'

make[4]: Entering directory `/root/R-3.2.3/src/library/stats'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/stats'

make[3]: Leaving directory `/root/R-3.2.3/src/library/stats'

make[3]: Entering directory `/root/R-3.2.3/src/library/datasets'

building package 'datasets'

make[4]: Entering directory `/root/R-3.2.3/src/library/datasets'

make[4]: Leaving directory `/root/R-3.2.3/src/library/datasets'

make[3]: Leaving directory `/root/R-3.2.3/src/library/datasets'

make[3]: Entering directory `/root/R-3.2.3/src/library/methods'

building package 'methods'

make[4]: Entering directory `/root/R-3.2.3/src/library/methods'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/methods'

make[4]: Entering directory `/root/R-3.2.3/src/library/methods'

make[5]: Entering directory `/root/R-3.2.3/src/library/methods/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/methods/src'

../../../../library/methods/libs/methods.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/methods/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/methods/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/methods'

make[4]: Entering directory `/root/R-3.2.3/src/library/methods'

make[4]: Nothing to be done for `RfilesLazy'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/methods'

make[3]: Leaving directory `/root/R-3.2.3/src/library/methods'

make[3]: Entering directory `/root/R-3.2.3/src/library/grid'

building package 'grid'

make[4]: Entering directory `/root/R-3.2.3/src/library/grid'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/grid'

make[4]: Entering directory `/root/R-3.2.3/src/library/grid'

make[5]: Entering directory `/root/R-3.2.3/src/library/grid/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/grid/src'

../../../../library/grid/libs/grid.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/grid/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/grid/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/grid'

make[4]: Entering directory `/root/R-3.2.3/src/library/grid'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/grid'

make[3]: Leaving directory `/root/R-3.2.3/src/library/grid'

make[3]: Entering directory `/root/R-3.2.3/src/library/splines'

building package 'splines'

make[4]: Entering directory `/root/R-3.2.3/src/library/splines'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/splines'

make[4]: Entering directory `/root/R-3.2.3/src/library/splines'

make[5]: Entering directory `/root/R-3.2.3/src/library/splines/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/splines/src'

../../../../library/splines/libs/splines.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/splines/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/splines/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/splines'

make[4]: Entering directory `/root/R-3.2.3/src/library/splines'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/splines'

make[3]: Leaving directory `/root/R-3.2.3/src/library/splines'

make[3]: Entering directory `/root/R-3.2.3/src/library/stats4'

building package 'stats4'

make[4]: Entering directory `/root/R-3.2.3/src/library/stats4'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/stats4'

make[4]: Entering directory `/root/R-3.2.3/src/library/stats4'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/stats4'

make[3]: Leaving directory `/root/R-3.2.3/src/library/stats4'

make[3]: Entering directory `/root/R-3.2.3/src/library/tcltk'

building package 'tcltk'

../../../library/tcltk/R/tcltk is unchanged

make[4]: Entering directory `/root/R-3.2.3/src/library/tcltk'

make[4]: Leaving directory `/root/R-3.2.3/src/library/tcltk'

make[3]: Leaving directory `/root/R-3.2.3/src/library/tcltk'

make[3]: Entering directory `/root/R-3.2.3/src/library/parallel'

building package 'parallel'

make[4]: Entering directory `/root/R-3.2.3/src/library/parallel'

all.R is unchanged

make[4]: Leaving directory `/root/R-3.2.3/src/library/parallel'

make[4]: Entering directory `/root/R-3.2.3/src/library/parallel'

make[5]: Entering directory `/root/R-3.2.3/src/library/parallel/src'

make[6]: Entering directory `/root/R-3.2.3/src/library/parallel/src'

../../../../library/parallel/libs/parallel.so is unchanged

make[6]: Leaving directory `/root/R-3.2.3/src/library/parallel/src'

make[5]: Leaving directory `/root/R-3.2.3/src/library/parallel/src'

make[4]: Leaving directory `/root/R-3.2.3/src/library/parallel'

make[4]: Entering directory `/root/R-3.2.3/src/library/parallel'

make[4]: Nothing to be done for `mklazycomp'.

make[4]: Leaving directory `/root/R-3.2.3/src/library/parallel'

make[3]: Leaving directory `/root/R-3.2.3/src/library/parallel'

make[3]: Entering directory `/root/R-3.2.3/src/library/base'

make[3]: Leaving directory `/root/R-3.2.3/src/library/base'

installing parsed NAMESPACE files

make[2]: Leaving directory `/root/R-3.2.3/src/library'

make[1]: Leaving directory `/root/R-3.2.3/src'

make[1]: Entering directory `/root/R-3.2.3/tests'

make[1]: Nothing to be done for `R'.

make[1]: Leaving directory `/root/R-3.2.3/tests'

make[1]: Entering directory `/root/R-3.2.3/doc'

'pdflatex' is needed to make NEWS.pdf but is missing on your system.

make[2]: Entering directory `/root/R-3.2.3/doc/manual'

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-FAQ.html will be missing and linked from CRAN

creating doc/manual/version.texi

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-admin.html will be missing and linked from CRAN

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-data.html will be missing and linked from CRAN

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-exts.html will be missing and linked from CRAN

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-intro.html will be missing and linked from CRAN

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-ints.html will be missing and linked from CRAN

'texi2any' v5.1 or later needed to make HTML docs but missing on your system.

file R-lang.html will be missing and linked from CRAN

make[3]: Entering directory `/root/R-3.2.3/doc/html'

make[3]: Leaving directory `/root/R-3.2.3/doc/html'

make[2]: Leaving directory `/root/R-3.2.3/doc/manual'

make[1]: Leaving directory `/root/R-3.2.3/doc'

make[1]: Entering directory `/root/R-3.2.3/src/library'

make[2]: Entering directory `/root/R-3.2.3/src/library'

installing parsed Rd

make[3]: Entering directory `/root/R-3.2.3/src/library'

  base

  stats

  utils

  methods

  graphics

  grDevices

  datasets

  grid

  tools

  tcltk

  splines

  stats4

  compiler

  parallel

make[3]: Leaving directory `/root/R-3.2.3/src/library'

make[2]: Leaving directory `/root/R-3.2.3/src/library'

make[2]: Entering directory `/root/R-3.2.3/src/library'

building/updating package metadata ...

make[2]: Leaving directory `/root/R-3.2.3/src/library'

make[2]: Entering directory `/root/R-3.2.3/src/library'

writing package indices

make[3]: Entering directory `/root/R-3.2.3/src/library'

make[3]: Leaving directory `/root/R-3.2.3/src/library'

make[2]: Leaving directory `/root/R-3.2.3/src/library'

make[1]: Leaving directory `/root/R-3.2.3/src/library'

make[1]: Entering directory `/root/R-3.2.3/src/library/Recommended'

make[2]: Entering directory `/root/R-3.2.3/src/library/Recommended'

make[2]: `stamp-recommended' is up to date.

make[2]: Leaving directory `/root/R-3.2.3/src/library/Recommended'

make[1]: Leaving directory `/root/R-3.2.3/src/library/Recommended'

make[1]: Entering directory `/root/R-3.2.3/src/library'

'pdflatex' is needed to make vignettes but is missing on your system.

make[1]: Leaving directory `/root/R-3.2.3/src/library'

make[1]: Entering directory `/root/R-3.2.3'

configuring Java ...

Java interpreter : /usr/bin/java

Java version     : 1.8.0_65

Java home path   : /usr/lib/jvm/java-1.8.0-openjdk-1.8.0.65-3.b17.el7.x86_64/jre

Java compiler    : /usr/bin/javac

Java headers gen.: /usr/bin/javah

Java archive tool: /usr/bin/jar

trying to compile and link a JNI program

detected JNI cpp flags    : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux

detected JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm

make[2]: Entering directory `/tmp/Rjavareconf.W2Gi6m'

ux -I/usr/local/include    -fpic  -g -O2  -c conftest.c -o conftest.o

gcc -std=gnu99 -shared -L/usr/local/lib64 -o conftest.so conftest.o -L/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.65-3.b17.el7.x86_64/jre/lib/amd64/server -ljvm

make[2]: Leaving directory `/tmp/Rjavareconf.W2Gi6m'

JAVA_HOME        : /usr/lib/jvm/java-1.8.0-openjdk-1.8.0.65-3.b17.el7.x86_64/jre

Java library path: $(JAVA_HOME)/lib/amd64/server

JNI cpp flags    : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux

JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm

Updating Java configuration in /root/R-3.2.3
Done.

make[1]: Leaving directory `/root/R-3.2.3'
[root@localhost R-3.2.3]# make install

mkdir -p -- /usr/local/lib64/R

make[1]: Entering directory `/root/R-3.2.3/m4'

make[1]: Nothing to be done for `install'.

make[1]: Leaving directory `/root/R-3.2.3/m4'

make[1]: Entering directory `/root/R-3.2.3/tools'

make[1]: Nothing to be done for `install'.

make[1]: Leaving directory `/root/R-3.2.3/tools'

make[1]: Entering directory `/root/R-3.2.3/doc'

installing doc ...

mkdir -p -- /usr/local/lib64/R/doc

make[2]: Entering directory `/root/R-3.2.3/doc/html'

installing doc/html ...

mkdir -p -- /usr/local/lib64/R/doc/html

make[2]: Leaving directory `/root/R-3.2.3/doc/html'

make[2]: Entering directory `/root/R-3.2.3/doc/manual'

installing doc/manual ...

mkdir -p -- /usr/local/lib64/R/doc/manual

mkdir -p -- /usr/local/lib64/R/doc/manual/images

make[2]: Leaving directory `/root/R-3.2.3/doc/manual'

make[1]: Leaving directory `/root/R-3.2.3/doc'

make[1]: Entering directory `/root/R-3.2.3/etc'

mkdir -p -- /usr/local/lib64/R/etc

installing etc ...

make[1]: Leaving directory `/root/R-3.2.3/etc'

make[1]: Entering directory `/root/R-3.2.3/share'

installing share ...

mkdir -p -- /usr/local/lib64/R/share

mkdir -p -- /usr/local/lib64/R/share/R

mkdir -p -- /usr/local/lib64/R/share/dictionaries

mkdir -p -- /usr/local/lib64/R/share/encodings

mkdir -p -- /usr/local/lib64/R/share/java

mkdir -p -- /usr/local/lib64/R/share/licenses

mkdir -p -- /usr/local/lib64/R/share/make

mkdir -p -- /usr/local/lib64/R/share/Rd

mkdir -p -- /usr/local/lib64/R/share/Rd/macros

mkdir -p -- /usr/local/lib64/R/share/sh

mkdir -p -- /usr/local/lib64/R/share/texmf

mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bib

mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bst

mkdir -p -- /usr/local/lib64/R/share/texmf/tex/latex

make[1]: Leaving directory `/root/R-3.2.3/share'

make[1]: Entering directory `/root/R-3.2.3/src'

make[2]: Entering directory `/root/R-3.2.3/src/scripts'

mkdir -p -- /usr/local/lib64/R/bin

make[2]: Leaving directory `/root/R-3.2.3/src/scripts'

make[2]: Entering directory `/root/R-3.2.3/src/include'

mkdir -p -- /usr/local/lib64/R/include

make[3]: Entering directory `/root/R-3.2.3/src/include/R_ext'

mkdir -p -- /usr/local/lib64/R/include/R_ext

make[3]: Leaving directory `/root/R-3.2.3/src/include/R_ext'

make[2]: Leaving directory `/root/R-3.2.3/src/include'

make[2]: Entering directory `/root/R-3.2.3/src/extra'

make[3]: Entering directory `/root/R-3.2.3/src/extra/blas'

mkdir -p -- /usr/local/lib64/R/lib

make[3]: Leaving directory `/root/R-3.2.3/src/extra/blas'

make[3]: Entering directory `/root/R-3.2.3/src/extra/bzip2'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/bzip2'

make[3]: Entering directory `/root/R-3.2.3/src/extra/pcre'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/pcre'

make[3]: Entering directory `/root/R-3.2.3/src/extra/tre'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/tre'

make[3]: Entering directory `/root/R-3.2.3/src/extra/xdr'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/xdr'

make[3]: Entering directory `/root/R-3.2.3/src/extra/xz'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/xz'

make[3]: Entering directory `/root/R-3.2.3/src/extra/zlib'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/zlib'

make[3]: Entering directory `/root/R-3.2.3/src/extra/intl'

make[3]: Nothing to be done for `install'.

make[3]: Leaving directory `/root/R-3.2.3/src/extra/intl'

make[2]: Leaving directory `/root/R-3.2.3/src/extra'

make[2]: Entering directory `/root/R-3.2.3/src/appl'

make[2]: Nothing to be done for `install'.

make[2]: Leaving directory `/root/R-3.2.3/src/appl'

make[2]: Entering directory `/root/R-3.2.3/src/nmath'

make[2]: Nothing to be done for `install'.

make[2]: Leaving directory `/root/R-3.2.3/src/nmath'

make[2]: Entering directory `/root/R-3.2.3/src/unix'

gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -g -O2  -L/usr/local/lib64 -DR_HOME='"/usr/local/lib64/R"' \

  -o Rscript ./Rscript.c

make[2]: Leaving directory `/root/R-3.2.3/src/unix'

make[2]: Entering directory `/root/R-3.2.3/src/main'

mkdir -p -- /usr/local/lib64/R/bin/exec

make[3]: Entering directory `/root/R-3.2.3/src/main'

make[3]: Leaving directory `/root/R-3.2.3/src/main'

make[2]: Leaving directory `/root/R-3.2.3/src/main'

make[2]: Entering directory `/root/R-3.2.3/src/modules'

make[3]: Entering directory `/root/R-3.2.3/src/modules/internet'

mkdir -p -- /usr/local/lib64/R/modules

make[3]: Leaving directory `/root/R-3.2.3/src/modules/internet'

make[3]: Entering directory `/root/R-3.2.3/src/modules/lapack'

make[3]: Leaving directory `/root/R-3.2.3/src/modules/lapack'

make[3]: Entering directory `/root/R-3.2.3/src/modules/X11'

make[3]: Leaving directory `/root/R-3.2.3/src/modules/X11'

make[2]: Leaving directory `/root/R-3.2.3/src/modules'

make[2]: Entering directory `/root/R-3.2.3/src/library'

mkdir -p -- /usr/local/lib64/R/library

installing packages ...

  building HTML index ...

make[2]: Leaving directory `/root/R-3.2.3/src/library'

make[1]: Leaving directory `/root/R-3.2.3/src'

make[1]: Entering directory `/root/R-3.2.3/tests'

make[1]: Nothing to be done for `install'.

make[1]: Leaving directory `/root/R-3.2.3/tests'
[root@localhost R-3.2.3]# R

R version 3.2.3 (2015-12-10) -- "Wooden Christmas-Tree"

Copyright (C) 2015 The R Foundation for Statistical Computing

Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.

You are welcome to redistribute it under certain conditions.

Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.

Type 'contributors()' for more information and

'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or

'help.start()' for an HTML browser interface to help.

Type 'q()' to quit R.

> 6+9

[1] 15