acm pku 1007 DNA Sorting
2008-04-03 12:55
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[align=center]DNA Sorting[/align]
Description
One measure of ``unsortedness'' in a sequence is the number of pairs of entries that are out of order with respect to each other. For instance, in the letter sequence ``DAABEC'', this measure is 5, since D is greater than four letters to its right and E is greater than one letter to its right. This measure is called the number of inversions in the sequence. The sequence ``AACEDGG'' has only one inversion (E and D)---it is nearly sorted---while the sequence ``ZWQM'' has 6 inversions (it is as unsorted as can be---exactly the reverse of sorted).
You are responsible for cataloguing a sequence of DNA strings (sequences containing only the four letters A, C, G, and T). However, you want to catalog them, not in alphabetical order, but rather in order of ``sortedness'', from ``most sorted'' to ``least sorted''. All the strings are of the same length.
Input
The first line contains two integers: a positive integer n (0 < n <= 50) giving the length of the strings; and a positive integer m (0 < m <= 100) giving the number of strings. These are followed by m lines, each containing a string of length n.
Output
Output the list of input strings, arranged from ``most sorted'' to ``least sorted''. Since two strings can be equally sorted, then output them according to the orginal order.
Sample Input
Sample Output
#include<iostream>
#include<algorithm>
using namespace std;
char dna[100][51];
struct DNA
...{
char s[50];
int num;
};
struct sort_f
...{
bool operator() (DNA d1,DNA d2)
...{
if(d1.num!=d2.num)
return d1.num<d2.num;
return strcmp(d1.s,d2.s)<0;
}
};
int main()
...{
int n,m,a,c,g,t;
DNA dna[100];
cin>>m>>n;
for(int pi=0;pi<n;++pi)
...{
cin>>dna[pi].s;
dna[pi].num=0;
}
for(int pj=0;pj<n;++pj)
...{
a=0,c=0,g=0,t=0;
for(int pk=m-1;pk>=0;--pk)
...{
if(dna[pj].s[pk]=='A')
...{
++a;
}
else if(dna[pj].s[pk]=='C')
...{
dna[pj].num+=a;
++c;
}
else if(dna[pj].s[pk]=='G')
...{
dna[pj].num+=a+c;
++g;
}
else if(dna[pj].s[pk]=='T')
...{
dna[pj].num+=a+c+g;
++t;
}
}
}
sort_f sf;
sort(dna,dna+n,sf);
for(int i=0;i<n;++i)
cout<<dna[i].s<<endl;
return 0;
}
Description
One measure of ``unsortedness'' in a sequence is the number of pairs of entries that are out of order with respect to each other. For instance, in the letter sequence ``DAABEC'', this measure is 5, since D is greater than four letters to its right and E is greater than one letter to its right. This measure is called the number of inversions in the sequence. The sequence ``AACEDGG'' has only one inversion (E and D)---it is nearly sorted---while the sequence ``ZWQM'' has 6 inversions (it is as unsorted as can be---exactly the reverse of sorted).
You are responsible for cataloguing a sequence of DNA strings (sequences containing only the four letters A, C, G, and T). However, you want to catalog them, not in alphabetical order, but rather in order of ``sortedness'', from ``most sorted'' to ``least sorted''. All the strings are of the same length.
Input
The first line contains two integers: a positive integer n (0 < n <= 50) giving the length of the strings; and a positive integer m (0 < m <= 100) giving the number of strings. These are followed by m lines, each containing a string of length n.
Output
Output the list of input strings, arranged from ``most sorted'' to ``least sorted''. Since two strings can be equally sorted, then output them according to the orginal order.
Sample Input
10 6 AACATGAAGG TTTTGGCCAA TTTGGCCAAA GATCAGATTT CCCGGGGGGA ATCGATGCAT
Sample Output
CCCGGGGGGA AACATGAAGG GATCAGATTT ATCGATGCAT TTTTGGCCAA TTTGGCCAAA
#include<iostream>
#include<algorithm>
using namespace std;
char dna[100][51];
struct DNA
...{
char s[50];
int num;
};
struct sort_f
...{
bool operator() (DNA d1,DNA d2)
...{
if(d1.num!=d2.num)
return d1.num<d2.num;
return strcmp(d1.s,d2.s)<0;
}
};
int main()
...{
int n,m,a,c,g,t;
DNA dna[100];
cin>>m>>n;
for(int pi=0;pi<n;++pi)
...{
cin>>dna[pi].s;
dna[pi].num=0;
}
for(int pj=0;pj<n;++pj)
...{
a=0,c=0,g=0,t=0;
for(int pk=m-1;pk>=0;--pk)
...{
if(dna[pj].s[pk]=='A')
...{
++a;
}
else if(dna[pj].s[pk]=='C')
...{
dna[pj].num+=a;
++c;
}
else if(dna[pj].s[pk]=='G')
...{
dna[pj].num+=a+c;
++g;
}
else if(dna[pj].s[pk]=='T')
...{
dna[pj].num+=a+c+g;
++t;
}
}
}
sort_f sf;
sort(dna,dna+n,sf);
for(int i=0;i<n;++i)
cout<<dna[i].s<<endl;
return 0;
}
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